Kapalı

I need R expert to create a shiny app that does what the Fragman program does

DELIVERABLES

The shiny app version of Fragman

ADDITIONAL INFORMATION

I generate data that has a series of peaks, representing fragments of DNA, in 5 colored channels. The raw output has time on the x-axis and peak height (in rfu, or relative fluorescence units) on the y axis

One channel contains a reference (known as a ladder). This has DNA fragments of known size. Using this reference, you can convert the x-axis from time to base-pair units.

I currently use the fragman program to 'call' the ladder peaks. Sometimes some peaks are missing (because of bleed-through from other channels), so often you need to manually correct the ladder calls.

I'd like to create a shiny-based web app to do what fragman does. It needs to display the data from one file at a time, display the calls it automatically assigns, and allow the user to remove bad calls (e.g. by right click) and add correct calls (e.g. by left click).

I will then integrate this into my analysis pipeline, which will also be shiny app-based.

I've written a manual script that does what I want it to, which can be used as a reference. However, I need help making this shiny compatible.

The bit I'm having trouble with is up to '[login to view URL](d, file = "./data/[login to view URL]", [login to view URL] = FALSE)'

But if you can streamline the whole workflow and get it on shiny I'd be happy.

It's got the data in there in /fsa.

I've got lots of other demo files (gigabytes).

I attached my codes and example data.

50, 75, 100, 125, 150, 200, 250, 300, 350, 400, 450, 475, 500, 550, 600, 650, 700, 750, 800, 850, 900, 950 and 1000 base pairs ([login to view URL]~0495fed3-7a77-41f4-9d32-87b93c4bbeba)

The ladder in these ones is in channel_4. It's got the same DNA fragments in though, just with a different dye.

Thanks.

Beceriler: İstatistik, İstatistiksel Analiz, R Programlama Dili, Veri İşleme, Veri Girişi

Daha fazlasını gör: how much does it cost to create an app, how much money does it cost to create an app, how much does it cost to hire someone to create an app, how to create a shiny app, create-react-app scripts-version, what does it take to create an app, how much does it cost to create an app in india, how to create shiny app in r, update create react app version, what does create-react-app do, check create react app version, this program does not support the version of windows your computer is running, create react app package.json version, create react app version number, how much does it cost to create an app like uber, how to update my create react app version, get updated version of create react app, how to update my version of create react app, how to know create-react-app version, how to create a shiny app in r

İşveren Hakkında:
( 59 değerlendirme ) Siem Reap, Cambodia

Proje NO: #31633737

Bu iş için 7 freelancer ortalamada $57 teklif veriyor

(356 Değerlendirme)
8.2
(31 Değerlendirme)
4.9
ksanalytics

Hi, I am a candidate with 5 years of Experience in Data Science and Market Research. I have professionally worked as a Data Scientist for over 3.5 Years and well versed with Statistical Techniques, Machine Learning a Daha Fazla

$20 USD in 2 gün içinde
(12 Değerlendirme)
2.8
erdemirtalha

Bilişim alanında başarılı olduğumu çevremdeki insanlar ve tabiki de bende düşünüyorum. Özellikle office programları ve pdf konusunda sizlere yardımcı olmayı çok isterim.

$65 USD in 7 gün içinde
(0 Değerlendirme)
0.0
Mishraaman12044

Iam certified data entry operator in English language so I can complete this project easily in one day

1 gün içinde %bids___i_sum_sub_32%%project_currencyDetails_sign_sub_33% USD
(0 Değerlendirme)
0.0
sujeet04

I have very good understanding on r software, also i build some useful web deployment using r shiny so have good experience to tackle problems.

$65 USD in 7 gün içinde
(0 Değerlendirme)
0.0
mwangelekaluba09

Good day sir, My name is Mwangele Kaluba. I have been working with R since 2018. I first started consulting in R in 2019. Since then I have taken multiple courses on R from Datacamp. I have also read multiple books on Daha Fazla

$65 USD in 7 gün içinde
(0 Değerlendirme)
0.0